Stem-loop egr-mir-10227d

Accession

MI0033130

Description

Echinococcus granulosus egr-mir-10227d precursor miRNA

Sequence

gagugUGGUGCUUGAUCAUACCACUGAuagacauggaucAGUUGUAUCAUCAAUGCAUCACAcucac
((((((((((((((((.((((.((((((........)))))).)))).))))).)))))))))))..

Structure

--           -     C    C      aga 
  gagugUGGUGC UUGAU AUAC ACUGAu   c
  ||||||||||| ||||| |||| ||||||    
  cucACACUACG AACUA UAUG UGAcua   a
ca           U     C    U      ggu 

Annotation confidence Not enough data

Genome context

APAU02000203.1: 69024-69090 [+]

Mature egr-miR-10227d-5p

• Accession: MIMAT0041227
• Description: Echinococcus granulosus egr-miR-10227d-5p mature miRNA
• Sequence: 6 - UGGUGCUUGAUCAUACCACUGA - 27
• Evidence: experimental ; Illumina [1]

Mature egr-miR-10227d-3p

• Accession: MIMAT0041228
• Description: Echinococcus granulosus egr-miR-10227d-3p mature miRNA
• Sequence: 40 - AGUUGUAUCAUCAAUGCAUCACA - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25168356
   Genome-wide sequencing of small RNAs reveals a tissue-specific loss of conserved microRNA families in Echinococcus granulosus
   Bai Y, Zhang Z, Jin L, Kang H, Zhu Y, Zhang L, Li X, Ma F, Zhao L, Shi B, Li J, McManus DP, Zhang W, Wang S
   BMC Genomics (2014) 15:736