Stem-loop egr-mir-10242

Accession

MI0033131

Description

Echinococcus granulosus egr-mir-10242 precursor miRNA

Sequence

cagggGACUUGGAUGGUUCUGCCUaaccagggGUGGAGGCCAUCCAAGUAGCucugg
(((((.((((((((((((((((((......))))))).)))))))))))..))))).

Structure

-     -G           -       aa 
 caggg  ACUUGGAUGGU UCUGCCU  c
 |||||  ||||||||||| |||||||   
 gucuC  UGAACCUACCG AGGUGgg  c
g     GA           G       ga 

Annotation confidence Not enough data

Genome context

APAU02000149.1: 53758-53814 [-]

Mature egr-miR-10242-5p

• Accession: MIMAT0041229
• Description: Echinococcus granulosus egr-miR-10242-5p mature miRNA
• Sequence: 6 - GACUUGGAUGGUUCUGCCU - 24
• Evidence: experimental ; Illumina [1]

Mature egr-miR-10242-3p

• Accession: MIMAT0041230
• Description: Echinococcus granulosus egr-miR-10242-3p mature miRNA
• Sequence: 33 - GUGGAGGCCAUCCAAGUAGC - 52
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25168356
   Genome-wide sequencing of small RNAs reveals a tissue-specific loss of conserved microRNA families in Echinococcus granulosus
   Bai Y, Zhang Z, Jin L, Kang H, Zhu Y, Zhang L, Li X, Ma F, Zhao L, Shi B, Li J, McManus DP, Zhang W, Wang S
   BMC Genomics (2014) 15:736