Stem-loop egr-mir-10247

Accession

MI0033136

Description

Echinococcus granulosus egr-mir-10247 precursor miRNA

Sequence

auuacAAUGGCACUGGGAUGGAUGGUAGaguggauuccuACCAUCCUCGUAGUGUGGUUCAaaccc
.....(((.((((((.((.(((((((((.(......)))))))))))).)))))).))).......

Structure

--auuac   G      G  U         a ug 
       AAU GCACUG GA GGAUGGUAG g  g
       ||| |||||| || ||||||||| |   
       UUG UGUGAU CU CCUACCAuc c  a
cccaaAC   G      G  -         - uu 

Annotation confidence Not enough data

Genome context

APAU02000279.1: 25695-25760 [+]

Mature egr-miR-10247-5p

• Accession: MIMAT0041239
• Description: Echinococcus granulosus egr-miR-10247-5p mature miRNA
• Sequence: 6 - AAUGGCACUGGGAUGGAUGGUAG - 28
• Evidence: experimental ; Illumina [1]

Mature egr-miR-10247-3p

• Accession: MIMAT0041240
• Description: Echinococcus granulosus egr-miR-10247-3p mature miRNA
• Sequence: 40 - ACCAUCCUCGUAGUGUGGUUCA - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25168356
   Genome-wide sequencing of small RNAs reveals a tissue-specific loss of conserved microRNA families in Echinococcus granulosus
   Bai Y, Zhang Z, Jin L, Kang H, Zhu Y, Zhang L, Li X, Ma F, Zhao L, Shi B, Li J, McManus DP, Zhang W, Wang S
   BMC Genomics (2014) 15:736