Stem-loop egr-mir-10248

Accession

MI0033137

Description

Echinococcus granulosus egr-mir-10248 precursor miRNA

Sequence

gagauGUGAGAAUACUGGACUAGGAUGcuauaaUCCAAUGUCAAGUGUUCUCACAAuuaca
....((((((((((((.(((..((((......))))...))).))))))))))))......

Structure

--gaga            G   -UA    Gc 
      uGUGAGAAUACU GAC   GGAU  u
      |||||||||||| |||   ||||   
      ACACUCUUGUGA CUG   CCUa  a
acauuA            A   UAA    au 

Annotation confidence Not enough data

Genome context

APAU02000047.1: 234474-234534 [-]

Mature egr-miR-10248-5p

• Accession: MIMAT0041241
• Description: Echinococcus granulosus egr-miR-10248-5p mature miRNA
• Sequence: 6 - GUGAGAAUACUGGACUAGGAUG - 27
• Evidence: experimental ; Illumina [1]

Mature egr-miR-10248-3p

• Accession: MIMAT0041242
• Description: Echinococcus granulosus egr-miR-10248-3p mature miRNA
• Sequence: 34 - UCCAAUGUCAAGUGUUCUCACAA - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25168356
   Genome-wide sequencing of small RNAs reveals a tissue-specific loss of conserved microRNA families in Echinococcus granulosus
   Bai Y, Zhang Z, Jin L, Kang H, Zhu Y, Zhang L, Li X, Ma F, Zhao L, Shi B, Li J, McManus DP, Zhang W, Wang S
   BMC Genomics (2014) 15:736