Stem-loop egr-mir-10249

Accession

MI0033138

Description

Echinococcus granulosus egr-mir-10249 precursor miRNA

Sequence

aacacAGCAACACCUGCGUCUCACAUaagguuGUGGUGGCGGUGGUGUUGAUGAuucag
....((.(((((((..(((((((((......))))).))))..))))))).))......

Structure

--aaca  G       UG    -     Ua 
      cA CAACACC  CGUC UCACA  a
      || |||||||  |||| |||||   
      GU GUUGUGG  GCGG GGUGu  g
gacuuA  A       UG    U     ug 

Annotation confidence Not enough data

Genome context

APAU02000002.1: 2432881-2432939 [-]

Mature egr-miR-10249-5p

• Accession: MIMAT0041243
• Description: Echinococcus granulosus egr-miR-10249-5p mature miRNA
• Sequence: 6 - AGCAACACCUGCGUCUCACAU - 26
• Evidence: experimental ; Illumina [1]

Mature egr-miR-10249-3p

• Accession: MIMAT0041244
• Description: Echinococcus granulosus egr-miR-10249-3p mature miRNA
• Sequence: 33 - GUGGUGGCGGUGGUGUUGAUGA - 54
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25168356
   Genome-wide sequencing of small RNAs reveals a tissue-specific loss of conserved microRNA families in Echinococcus granulosus
   Bai Y, Zhang Z, Jin L, Kang H, Zhu Y, Zhang L, Li X, Ma F, Zhao L, Shi B, Li J, McManus DP, Zhang W, Wang S
   BMC Genomics (2014) 15:736