Stem-loop egr-mir-10250

Accession

MI0033140

Description

Echinococcus granulosus egr-mir-10250 precursor miRNA

Sequence

acacuGUGAUCUGCCAAUUUGCUCUCggccgucgcUCUAAAAUUGGCGGGUCAAAGcguac
((.((.((((((((((((((......(((....)))...)))))))))))))).)).))..

Structure

--  a  G              GCUCUC   c 
  ac cu UGAUCUGCCAAUUU      ggc g
  || || ||||||||||||||      |||  
  ug GA ACUGGGCGGUUAAA      Ucg u
ca  c  A              ---AUC   c 

Annotation confidence Not enough data

Genome context

APAU02000053.1: 558336-558396 [+]

Mature egr-miR-10250-5p

• Accession: MIMAT0041247
• Description: Echinococcus granulosus egr-miR-10250-5p mature miRNA
• Sequence: 6 - GUGAUCUGCCAAUUUGCUCUC - 26
• Evidence: experimental ; Illumina [1]

Mature egr-miR-10250-3p

• Accession: MIMAT0041248
• Description: Echinococcus granulosus egr-miR-10250-3p mature miRNA
• Sequence: 36 - UCUAAAAUUGGCGGGUCAAAG - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25168356
   Genome-wide sequencing of small RNAs reveals a tissue-specific loss of conserved microRNA families in Echinococcus granulosus
   Bai Y, Zhang Z, Jin L, Kang H, Zhu Y, Zhang L, Li X, Ma F, Zhao L, Shi B, Li J, McManus DP, Zhang W, Wang S
   BMC Genomics (2014) 15:736