Stem-loop egr-mir-10251

Accession

MI0033141

Description

Echinococcus granulosus egr-mir-10251 precursor miRNA

Sequence

gagguGCCUGAUUUGAGUGCAGCCUcauguagGCAGGACAUCGAAUCAGGAAAuucca
(((...((((((((((((.(.((((.....)))).).)).))))))))))...)))..

Structure

--   guG          -  G A    c 
  gag   CCUGAUUUGA GU C GCCU a
  |||   |||||||||| || | |||| u
  cuu   GGACUAAGCU CA G CGga g
ac   AAA          A  G A    u 

Annotation confidence Not enough data

Genome context

APAU02000152.1: 169610-169667 [+]

Mature egr-miR-10251-5p

• Accession: MIMAT0041249
• Description: Echinococcus granulosus egr-miR-10251-5p mature miRNA
• Sequence: 6 - GCCUGAUUUGAGUGCAGCCU - 25
• Evidence: experimental ; Illumina [1]

Mature egr-miR-10251-3p

• Accession: MIMAT0041250
• Description: Echinococcus granulosus egr-miR-10251-3p mature miRNA
• Sequence: 33 - GCAGGACAUCGAAUCAGGAAA - 53
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25168356
   Genome-wide sequencing of small RNAs reveals a tissue-specific loss of conserved microRNA families in Echinococcus granulosus
   Bai Y, Zhang Z, Jin L, Kang H, Zhu Y, Zhang L, Li X, Ma F, Zhao L, Shi B, Li J, McManus DP, Zhang W, Wang S
   BMC Genomics (2014) 15:736