Stem-loop egr-mir-10252

Accession

MI0033142

Description

Echinococcus granulosus egr-mir-10252 precursor miRNA

Sequence

caccgUACGUGCAUUUCAGCUCAUCUUcuccacugcuuggagUCUGAGGUGAAAAUGCGCGAAUUucucc
.......(((((((((((.((((....(((((.....)))))..)))).)).))))))))).........

Structure

--caccgUA         -  G    UCUU     c 
         CGUGCAUUU CA CUCA    cucca u
         ||||||||| || ||||    ||||| g
         GCGCGUAAA GU GAGU    gaggu c
ccucuUUAA         A  G    --CU     u 

Annotation confidence Not enough data

Genome context

APAU02000015.1: 1328238-1328307 [-]

Mature egr-miR-10252-5p

• Accession: MIMAT0041251
• Description: Echinococcus granulosus egr-miR-10252-5p mature miRNA
• Sequence: 6 - UACGUGCAUUUCAGCUCAUCUU - 27
• Evidence: experimental ; Illumina [1]

Mature egr-miR-10252-3p

• Accession: MIMAT0041252
• Description: Echinococcus granulosus egr-miR-10252-3p mature miRNA
• Sequence: 43 - UCUGAGGUGAAAAUGCGCGAAUU - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25168356
   Genome-wide sequencing of small RNAs reveals a tissue-specific loss of conserved microRNA families in Echinococcus granulosus
   Bai Y, Zhang Z, Jin L, Kang H, Zhu Y, Zhang L, Li X, Ma F, Zhao L, Shi B, Li J, McManus DP, Zhang W, Wang S
   BMC Genomics (2014) 15:736