Stem-loop egr-mir-10253

Accession

MI0033144

Description

Echinococcus granulosus egr-mir-10253 precursor miRNA

Sequence

gguauCCAAACCGUUCCAAUAGUCGacaguuuaaacccacCGACUACUGGAACGGUUUAACcucag
(((....(((((((((((.((((((...............)))))).))))))))))).)))....

Structure

----   auCC           A      acaguu 
    ggu    AAACCGUUCCA UAGUCG      u
    |||    ||||||||||| ||||||      a
    cCA    UUUGGCAAGGU AUCAGC      a
gacu   ---A           C      caccca 

Annotation confidence Not enough data

Genome context

APAU02000003.1: 539111-539176 [-]

Mature egr-miR-10253-5p

• Accession: MIMAT0041255
• Description: Echinococcus granulosus egr-miR-10253-5p mature miRNA
• Sequence: 6 - CCAAACCGUUCCAAUAGUCG - 25
• Evidence: experimental ; Illumina [1]

Mature egr-miR-10253-3p

• Accession: MIMAT0041256
• Description: Echinococcus granulosus egr-miR-10253-3p mature miRNA
• Sequence: 41 - CGACUACUGGAACGGUUUAAC - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25168356
   Genome-wide sequencing of small RNAs reveals a tissue-specific loss of conserved microRNA families in Echinococcus granulosus
   Bai Y, Zhang Z, Jin L, Kang H, Zhu Y, Zhang L, Li X, Ma F, Zhao L, Shi B, Li J, McManus DP, Zhang W, Wang S
   BMC Genomics (2014) 15:736