Stem-loop egr-mir-10254

Accession

MI0033145

Description

Echinococcus granulosus egr-mir-10254 precursor miRNA

Sequence

cuuuuCCUCCUUCUGUUCGACCAAUUcagucaugcacccucuaaccacugcgaUUGGUCCAAUAAAGAAGGUGGAGuuuuu
...((((.(((((((((.((((((((((((................)))).)))))))).)))..)))))).)))).....

Structure

--cuu    U      --   C        -    caugcac 
     uuCC CCUUCU  GUU GACCAAUU cagu       c
     |||| ||||||  ||| |||||||| ||||        
     GAGG GGAAGA  UAA CUGGUUag guca       c
uuuuu    U      AA   C        c    ccaaucu 

Annotation confidence Not enough data

Genome context

APAU02000228.1: 50235-50315 [-]

Mature egr-miR-10254-5p

• Accession: MIMAT0041257
• Description: Echinococcus granulosus egr-miR-10254-5p mature miRNA
• Sequence: 6 - CCUCCUUCUGUUCGACCAAUU - 26
• Evidence: experimental ; Illumina [1]

Mature egr-miR-10254-3p

• Accession: MIMAT0041258
• Description: Echinococcus granulosus egr-miR-10254-3p mature miRNA
• Sequence: 54 - UUGGUCCAAUAAAGAAGGUGGAG - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25168356
   Genome-wide sequencing of small RNAs reveals a tissue-specific loss of conserved microRNA families in Echinococcus granulosus
   Bai Y, Zhang Z, Jin L, Kang H, Zhu Y, Zhang L, Li X, Ma F, Zhao L, Shi B, Li J, McManus DP, Zhang W, Wang S
   BMC Genomics (2014) 15:736