miRBase entry: egr-mir-10256

Stem-loop egr-mir-10256


Accession
MI0033147
Description
Echinococcus granulosus egr-mir-10256 precursor miRNA


Sequence

ugccaUGGGCUAAAGUUGGUACAUGUAccuagacgguugugugCAUGUCUGCUAUGGCCCAUCuagau
....((((((((.(((.((.(((((((((.........).))))))))))))).))))))))......

Structure
--ugcc        A   U  U        - uag 
      aUGGGCUA AGU GG ACAUGUAc c   a
      |||||||| ||| || |||||||| |   c
      UACCCGGU UCG UC UGUACgug g   g
uagauC        A   -  -        u uug 


Annotation confidence Not enough data
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Genome context
APAU02000149.1: 2603-2670 [-]

Database links

Mature egr-miR-10256-5p

Accession MIMAT0041261
Description Echinococcus granulosus egr-miR-10256-5p mature miRNA
Sequence 6 - UGGGCUAAAGUUGGUACAUGUA - 27
Evidence experimental
Illumina [1]

Mature egr-miR-10256-3p

Accession MIMAT0041262
Description Echinococcus granulosus egr-miR-10256-3p mature miRNA
Sequence 44 - CAUGUCUGCUAUGGCCCAUC - 63
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25168356
    Genome-wide sequencing of small RNAs reveals a tissue-specific loss of conserved microRNA families in Echinococcus granulosus
    Bai Y, Zhang Z, Jin L, Kang H, Zhu Y, Zhang L, Li X, Ma F, Zhao L, Shi B, Li J, McManus DP, Zhang W, Wang S
    BMC Genomics (2014) 15:736