Stem-loop egr-mir-10256

Accession

MI0033147

Description

Echinococcus granulosus egr-mir-10256 precursor miRNA

Sequence

ugccaUGGGCUAAAGUUGGUACAUGUAccuagacgguugugugCAUGUCUGCUAUGGCCCAUCuagau
....((((((((.(((.((.(((((((((.........).))))))))))))).))))))))......

Structure

--ugcc        A   U  U        - uag 
      aUGGGCUA AGU GG ACAUGUAc c   a
      |||||||| ||| || |||||||| |   c
      UACCCGGU UCG UC UGUACgug g   g
uagauC        A   -  -        u uug 

Annotation confidence Not enough data

Genome context

APAU02000149.1: 2603-2670 [-]

Mature egr-miR-10256-5p

• Accession: MIMAT0041261
• Description: Echinococcus granulosus egr-miR-10256-5p mature miRNA
• Sequence: 6 - UGGGCUAAAGUUGGUACAUGUA - 27
• Evidence: experimental ; Illumina [1]

Mature egr-miR-10256-3p

• Accession: MIMAT0041262
• Description: Echinococcus granulosus egr-miR-10256-3p mature miRNA
• Sequence: 44 - CAUGUCUGCUAUGGCCCAUC - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25168356
   Genome-wide sequencing of small RNAs reveals a tissue-specific loss of conserved microRNA families in Echinococcus granulosus
   Bai Y, Zhang Z, Jin L, Kang H, Zhu Y, Zhang L, Li X, Ma F, Zhao L, Shi B, Li J, McManus DP, Zhang W, Wang S
   BMC Genomics (2014) 15:736