Stem-loop egr-mir-10257

Accession

MI0033148

Description

Echinococcus granulosus egr-mir-10257 precursor miRNA

Sequence

ccagcGGUGCCAUUAGUGUGAUAGGcucagcguugaucuauucaacaucagccUUCAUGCGCUUGGAGCGUgcaga
...(((((.(((...((((((.(((((....(((((.....)))))...)))))))))))...))).)).)))...

Structure

cca   -  G   UUA      U     cagc     u 
   gcG GU CCA   GUGUGA AGGcu    guuga c
   ||| || |||   |||||| |||||    ||||| u
   cgU CG GGU   CGUACU Uccga    caacu a
aga   G  A   UCG      -     -cua     u 

Annotation confidence Not enough data

Genome context

APAU02000186.1: 30323-30398 [-]

Mature egr-miR-10257-5p

• Accession: MIMAT0041263
• Description: Echinococcus granulosus egr-miR-10257-5p mature miRNA
• Sequence: 6 - GGUGCCAUUAGUGUGAUAGG - 25
• Evidence: experimental ; Illumina [1]

Mature egr-miR-10257-3p

• Accession: MIMAT0041264
• Description: Echinococcus granulosus egr-miR-10257-3p mature miRNA
• Sequence: 54 - UUCAUGCGCUUGGAGCGU - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25168356
   Genome-wide sequencing of small RNAs reveals a tissue-specific loss of conserved microRNA families in Echinococcus granulosus
   Bai Y, Zhang Z, Jin L, Kang H, Zhu Y, Zhang L, Li X, Ma F, Zhao L, Shi B, Li J, McManus DP, Zhang W, Wang S
   BMC Genomics (2014) 15:736