Stem-loop egr-mir-10262

Accession

MI0033153

Description

Echinococcus granulosus egr-mir-10262 precursor miRNA

Sequence

ggaauACCACAAAAAACUGCCGAAAAcgauaaguaaaauccuuuUUUGGUAGUUUUUUGUAGGAUUucgua
(((((.((((((((((((((((((((.(((.......)))..)))))))))))))))))).)))))))...

Structure

---     A  -                  -c   aa 
   ggaau CC ACAAAAAACUGCCGAAAA  gau  g
   ||||| || ||||||||||||||||||  |||  u
   cuUUA GG UGUUUUUUGAUGGUUUuu  cua  a
aug     -  A                  uc   aa 

Annotation confidence Not enough data

Genome context

APAU02000031.1: 454221-454291 [+]

Mature egr-miR-10262-5p

• Accession: MIMAT0041273
• Description: Echinococcus granulosus egr-miR-10262-5p mature miRNA
• Sequence: 6 - ACCACAAAAAACUGCCGAAAA - 26
• Evidence: experimental ; Illumina [1]

Mature egr-miR-10262-3p

• Accession: MIMAT0041274
• Description: Echinococcus granulosus egr-miR-10262-3p mature miRNA
• Sequence: 45 - UUUGGUAGUUUUUUGUAGGAUU - 66
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25168356
   Genome-wide sequencing of small RNAs reveals a tissue-specific loss of conserved microRNA families in Echinococcus granulosus
   Bai Y, Zhang Z, Jin L, Kang H, Zhu Y, Zhang L, Li X, Ma F, Zhao L, Shi B, Li J, McManus DP, Zhang W, Wang S
   BMC Genomics (2014) 15:736