Stem-loop egr-mir-10263

Accession

MI0033154

Description

Echinococcus granulosus egr-mir-10263 precursor miRNA

Sequence

2592 reads, 198.0 reads per million, 13 experiments

cuuucaAUUUGCUCUGGGUUAGUAGAaggcauuuuaaaugcacUACUAAACCAAGAGACAAAUUGaaacac
.((((((((((((((((..((((((...(((((...))))).))))))..)).)))).))))))))))...

Structure

--c          -    -  GU      Aag     u 
   uuucaAUUUG CUCU GG  UAGUAG   gcauu  
   |||||||||| |||| ||  ||||||   ||||| u
   aaaGUUAAAC GAGA CC  AUCAUc   cguaa  
cac          A    A  AA      --a     a 

Annotation confidence Medium

Genome context

APAU02000042.1: 460162-460232 [-]

Mature egr-miR-10263-5p

• Accession: MIMAT0041275
• Description: Echinococcus granulosus egr-miR-10263-5p mature miRNA
• Sequence: 7 - AUUUGCUCUGGGUUAGUAGA - 26
• Evidence: experimental ; Illumina [1]

Mature egr-miR-10263-3p

• Accession: MIMAT0041276
• Description: Echinococcus granulosus egr-miR-10263-3p mature miRNA
• Sequence: 44 - UACUAAACCAAGAGACAAAUUG - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25168356
   Genome-wide sequencing of small RNAs reveals a tissue-specific loss of conserved microRNA families in Echinococcus granulosus
   Bai Y, Zhang Z, Jin L, Kang H, Zhu Y, Zhang L, Li X, Ma F, Zhao L, Shi B, Li J, McManus DP, Zhang W, Wang S
   BMC Genomics (2014) 15:736