Stem-loop egr-mir-10264

Accession

MI0033155

Description

Echinococcus granulosus egr-mir-10264 precursor miRNA

Sequence

CUGAUUCGAAACCUCGGCCuuuuuguuacuguucuuuggguuucccuaacaugacucccacugcguaauuagaGGAUUGUUUCGGGUGGGC
((.(((((((((.....(((((..(((((.((....((((..((........))..))))..))))))).)))))...))))))))).)).

Structure

-  G         CUCGG     uu     u  ucuu    uu  ccu 
 CU AUUCGAAAC     CCuuu  guuac gu    uggg  uc   a
 || |||||||||     |||||  ||||| ||    ||||  ||    
 GG UGGGCUUUG     GGaga  uaaug cg    accc  ag   a
C  G         --UUA     -u     -  --uc    uc  uac 

Annotation confidence Not enough data

Genome context

APAU02000213.1: 78410-78500 [+]

Mature egr-miR-10264-5p

• Accession: MIMAT0041277
• Description: Echinococcus granulosus egr-miR-10264-5p mature miRNA
• Sequence: 1 - CUGAUUCGAAACCUCGGCC - 19
• Evidence: experimental ; Illumina [1]

Mature egr-miR-10264-3p

• Accession: MIMAT0041278
• Description: Echinococcus granulosus egr-miR-10264-3p mature miRNA
• Sequence: 74 - GGAUUGUUUCGGGUGGGC - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25168356
   Genome-wide sequencing of small RNAs reveals a tissue-specific loss of conserved microRNA families in Echinococcus granulosus
   Bai Y, Zhang Z, Jin L, Kang H, Zhu Y, Zhang L, Li X, Ma F, Zhao L, Shi B, Li J, McManus DP, Zhang W, Wang S
   BMC Genomics (2014) 15:736