Stem-loop egr-mir-10266

Accession

MI0033157

Description

Echinococcus granulosus egr-mir-10266 precursor miRNA

Sequence

CCUCCUUCCUGCUUUUUUUCaccucggugcuguccagcuaacuuguAGGAAAGUGAAGGAGGCA
((((((((..((((((((.((....((((((....)))..))))).))))))))))))))))..

Structure

--        CU        U  ccuc   --   g 
  CCUCCUUC  GCUUUUUU Ca    ggu  gcu u
  ||||||||  |||||||| ||    |||  |||  
  GGAGGAAG  UGAAAGGA gu    uca  cga c
AC        --        u  ----   au   c 

Annotation confidence Not enough data

Genome context

APAU02000013.1: 333868-333931 [-]

Mature egr-miR-10266-5p

• Accession: MIMAT0041281
• Description: Echinococcus granulosus egr-miR-10266-5p mature miRNA
• Sequence: 1 - CCUCCUUCCUGCUUUUUUUC - 20
• Evidence: experimental ; Illumina [1]

Mature egr-miR-10266-3p

• Accession: MIMAT0041282
• Description: Echinococcus granulosus egr-miR-10266-3p mature miRNA
• Sequence: 47 - AGGAAAGUGAAGGAGGCA - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25168356
   Genome-wide sequencing of small RNAs reveals a tissue-specific loss of conserved microRNA families in Echinococcus granulosus
   Bai Y, Zhang Z, Jin L, Kang H, Zhu Y, Zhang L, Li X, Ma F, Zhao L, Shi B, Li J, McManus DP, Zhang W, Wang S
   BMC Genomics (2014) 15:736