Stem-loop egr-mir-10267

Accession

MI0033158

Description

Echinococcus granulosus egr-mir-10267 precursor miRNA

Sequence

AUGCGGAUGGUUAAGGAAUGGGgagaaugaccuugacaggagagucccugaggugccagucccCAGAUCAAACCACCGCAGAC
.(((((.(((((...((.((((((.....((((...((((......)))))))).....))))))..)).))))))))))...

Structure

--A     A     AAG  -A      gaaug    uga    ag 
   UGCGG UGGUU   GA  UGGGga     accu   cagg  a
   ||||| |||||   ||  ||||||     ||||   ||||   
   ACGCC ACCAA   CU  ACcccu     ugga   gucc  g
CAG     -     --A  AG      gaccg    ---    cu 

Annotation confidence Not enough data

Genome context

APAU02000009.1: 640818-640900 [-]

Mature egr-miR-10267-5p

• Accession: MIMAT0041283
• Description: Echinococcus granulosus egr-miR-10267-5p mature miRNA
• Sequence: 1 - AUGCGGAUGGUUAAGGAAUGGG - 22
• Evidence: experimental ; Illumina [1]

Mature egr-miR-10267-3p

• Accession: MIMAT0041284
• Description: Echinococcus granulosus egr-miR-10267-3p mature miRNA
• Sequence: 64 - CAGAUCAAACCACCGCAGAC - 83
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25168356
   Genome-wide sequencing of small RNAs reveals a tissue-specific loss of conserved microRNA families in Echinococcus granulosus
   Bai Y, Zhang Z, Jin L, Kang H, Zhu Y, Zhang L, Li X, Ma F, Zhao L, Shi B, Li J, McManus DP, Zhang W, Wang S
   BMC Genomics (2014) 15:736