Stem-loop egr-mir-10270

Accession

MI0033161

Description

Echinococcus granulosus egr-mir-10270 precursor miRNA

Sequence

GUAGAUCGUUUGGCGAUAAGCggugaacagugauuuacagUGAAGGCCAAACAUCUACCA
((((((.(((((((.....((.(((((......))))).))....)))))))))))))..

Structure

--      C       GAUAA  g     ca 
  GUAGAU GUUUGGC     GC gugaa  g
  |||||| |||||||     || |||||   
  CAUCUA CAAACCG     Ug cauuu  u
AC      -       -GAAG  a     ag 

Annotation confidence Not enough data

Genome context

APAU02000009.1: 84655-84714 [+]

Mature egr-miR-10270-5p

• Accession: MIMAT0041289
• Description: Echinococcus granulosus egr-miR-10270-5p mature miRNA
• Sequence: 1 - GUAGAUCGUUUGGCGAUAAGC - 21
• Evidence: experimental ; Illumina [1]

Mature egr-miR-10270-3p

• Accession: MIMAT0041290
• Description: Echinococcus granulosus egr-miR-10270-3p mature miRNA
• Sequence: 41 - UGAAGGCCAAACAUCUACCA - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25168356
   Genome-wide sequencing of small RNAs reveals a tissue-specific loss of conserved microRNA families in Echinococcus granulosus
   Bai Y, Zhang Z, Jin L, Kang H, Zhu Y, Zhang L, Li X, Ma F, Zhao L, Shi B, Li J, McManus DP, Zhang W, Wang S
   BMC Genomics (2014) 15:736