Stem-loop egr-mir-10276

Accession

MI0033167

Description

Echinococcus granulosus egr-mir-10276 precursor miRNA

Sequence

CGGUGUGGGAGUAGAUUUCUGagaacauuuuagugaccuuaGAGGAUAUGCUCAGCACUGUU
((((((..(((((..((((((((..(((....)))..))))))))...))))).))))))..

Structure

--      GG     -GA        aa   u 
  CGGUGU  GAGUA   UUUCUGag  cau u
  ||||||  |||||   ||||||||  |||  
  GUCACG  CUCGU   GGAGauuc  gug u
UU      -A     AUA        ca   a 

Annotation confidence Not enough data

Genome context

APAU02000168.1: 121161-121222 [+]

Mature egr-miR-10276-5p

• Accession: MIMAT0041301
• Description: Echinococcus granulosus egr-miR-10276-5p mature miRNA
• Sequence: 1 - CGGUGUGGGAGUAGAUUUCUG - 21
• Evidence: experimental ; Illumina [1]

Mature egr-miR-10276-3p

• Accession: MIMAT0041302
• Description: Echinococcus granulosus egr-miR-10276-3p mature miRNA
• Sequence: 42 - GAGGAUAUGCUCAGCACUGUU - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25168356
   Genome-wide sequencing of small RNAs reveals a tissue-specific loss of conserved microRNA families in Echinococcus granulosus
   Bai Y, Zhang Z, Jin L, Kang H, Zhu Y, Zhang L, Li X, Ma F, Zhao L, Shi B, Li J, McManus DP, Zhang W, Wang S
   BMC Genomics (2014) 15:736