Stem-loop egr-mir-10280

Accession

MI0033171

Description

Echinococcus granulosus egr-mir-10280 precursor miRNA

Sequence

GGGAGGGAGUGAGGGAGGUAGAUagugucCCACUGCCUUCACAUCCUCCGUA
.((((((.(((((((.(((.(((...)))..))).))))))).))))))...

Structure

--G      A       A   -A   a 
   GGAGGG GUGAGGG GGU  GAU  
   |||||| ||||||| |||  ||| g
   CCUCCU CACUUCC UCA  cug  
AUG      A       G   CC   u 

Annotation confidence Not enough data

Genome context

APAU02000021.1: 516085-516136 [+]

Mature egr-miR-10280-5p

• Accession: MIMAT0041309
• Description: Echinococcus granulosus egr-miR-10280-5p mature miRNA
• Sequence: 1 - GGGAGGGAGUGAGGGAGGUAGAU - 23
• Evidence: experimental ; Illumina [1]

Mature egr-miR-10280-3p

• Accession: MIMAT0041310
• Description: Echinococcus granulosus egr-miR-10280-3p mature miRNA
• Sequence: 30 - CCACUGCCUUCACAUCCUCCGUA - 52
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25168356
   Genome-wide sequencing of small RNAs reveals a tissue-specific loss of conserved microRNA families in Echinococcus granulosus
   Bai Y, Zhang Z, Jin L, Kang H, Zhu Y, Zhang L, Li X, Ma F, Zhao L, Shi B, Li J, McManus DP, Zhang W, Wang S
   BMC Genomics (2014) 15:736