Stem-loop egr-mir-10285

Accession

MI0033176

Description

Echinococcus granulosus egr-mir-10285 precursor miRNA

Sequence

AAAUGGACCACAAAGAACGCgcuaauagacagcgcGUCCUUUGUGGUCCAUUUGU
(((((((((((((((.(((((((.......))))))).)))))))))))))))..

Structure

--               A       aa 
  AAAUGGACCACAAAG ACGCgcu  u
  ||||||||||||||| |||||||  a
  UUUACCUGGUGUUUC UGcgcga  g
UG               C       ca 

Annotation confidence Not enough data

Genome context

APAU02000057.1: 342935-342989 [-]

Mature egr-miR-10285-5p

• Accession: MIMAT0041319
• Description: Echinococcus granulosus egr-miR-10285-5p mature miRNA
• Sequence: 1 - AAAUGGACCACAAAGAACGC - 20
• Evidence: experimental ; Illumina [1]

Mature egr-miR-10285-3p

• Accession: MIMAT0041320
• Description: Echinococcus granulosus egr-miR-10285-3p mature miRNA
• Sequence: 36 - GUCCUUUGUGGUCCAUUUGU - 55
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25168356
   Genome-wide sequencing of small RNAs reveals a tissue-specific loss of conserved microRNA families in Echinococcus granulosus
   Bai Y, Zhang Z, Jin L, Kang H, Zhu Y, Zhang L, Li X, Ma F, Zhao L, Shi B, Li J, McManus DP, Zhang W, Wang S
   BMC Genomics (2014) 15:736