Stem-loop egr-mir-10286

Accession

MI0033177

Description

Echinococcus granulosus egr-mir-10286 precursor miRNA

Sequence

CAUCCUAAUUCCAUGCUUGUUUUCAgacucugccgucgauuuggacgcauugucugGGGACGAGGAUAGCGAUGGGAUAUC
.((((((..(((((.(((((((((((((..(((.(((......))))))..))))))))))))).)).).))))))))...

Structure

--C      AU  - -  G             uc   c   ga 
   AUCCUA  UC C AU CUUGUUUUCAgac  ugc guc  u
   ||||||  || | || |||||||||||||  ||| |||   
   UAGGGU  AG G UA GAGCAGGGgucug  acg cag  u
CUA      --  C A  G             uu   -   gu 

Annotation confidence Not enough data

Genome context

APAU02000014.1: 57549-57629 [+]

Mature egr-miR-10286-5p

• Accession: MIMAT0041321
• Description: Echinococcus granulosus egr-miR-10286-5p mature miRNA
• Sequence: 1 - CAUCCUAAUUCCAUGCUUGUUUUCA - 25
• Evidence: experimental ; Illumina [1]

Mature egr-miR-10286-3p

• Accession: MIMAT0041322
• Description: Echinococcus granulosus egr-miR-10286-3p mature miRNA
• Sequence: 57 - GGGACGAGGAUAGCGAUGGGAUAUC - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25168356
   Genome-wide sequencing of small RNAs reveals a tissue-specific loss of conserved microRNA families in Echinococcus granulosus
   Bai Y, Zhang Z, Jin L, Kang H, Zhu Y, Zhang L, Li X, Ma F, Zhao L, Shi B, Li J, McManus DP, Zhang W, Wang S
   BMC Genomics (2014) 15:736