Stem-loop egr-mir-10289

Accession

MI0033180

Description

Echinococcus granulosus egr-mir-10289 precursor miRNA

Sequence

GCGUAGGUGCGCGGGGCGAuaucgcuuggacauacuguacaguuaagugaauuaucUCCCUUCCGCAUUUAGCCC
((.((((((((.((((.(((((((((((.((..........)))))))))..)))).))))..))))))))))..

Structure

--  G        -C    C    --       g  auac 
  GC UAGGUGCG  GGGG GAua  ucgcuug ac    u
  || ||||||||  |||| ||||  ||||||| ||     
  CG AUUUACGC  UCCC cuau  agugaau ug    g
CC  -        CU    U    ua       -  acau 

Annotation confidence Not enough data

Genome context

APAU02000200.1: 74546-74620 [-]

Mature egr-miR-10289-5p

• Accession: MIMAT0041327
• Description: Echinococcus granulosus egr-miR-10289-5p mature miRNA
• Sequence: 1 - GCGUAGGUGCGCGGGGCGA - 19
• Evidence: experimental ; Illumina [1]

Mature egr-miR-10289-3p

• Accession: MIMAT0041328
• Description: Echinococcus granulosus egr-miR-10289-3p mature miRNA
• Sequence: 57 - UCCCUUCCGCAUUUAGCCC - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25168356
   Genome-wide sequencing of small RNAs reveals a tissue-specific loss of conserved microRNA families in Echinococcus granulosus
   Bai Y, Zhang Z, Jin L, Kang H, Zhu Y, Zhang L, Li X, Ma F, Zhao L, Shi B, Li J, McManus DP, Zhang W, Wang S
   BMC Genomics (2014) 15:736