Stem-loop egr-mir-10292

Accession

MI0033183

Description

Echinococcus granulosus egr-mir-10292 precursor miRNA

Sequence

AGAAUGCCCGCAAUAUUUCUGgcgccguauguccuagcuccgcuaggguuguuagccaGCUGUUGCGGUCAUGUUG
...(((.((((((((...(((((........(((((((...)))))))......))))).)))))))).)))....

Structure

-AGA   C        UUU     gccguaug       u 
    AUG CCGCAAUA   CUGgc        uccuagc  
    ||| ||||||||   |||||        ||||||| c
    UAC GGCGUUGU   Gaccg        gggaucg  
GUUG   U        --C     --auuguu       c 

Annotation confidence Not enough data

Genome context

APAU02000387.1: 1545-1620 [-]

Mature egr-miR-10292-5p

• Accession: MIMAT0041333
• Description: Echinococcus granulosus egr-miR-10292-5p mature miRNA
• Sequence: 1 - AGAAUGCCCGCAAUAUUUCUG - 21
• Evidence: experimental ; Illumina [1]

Mature egr-miR-10292-3p

• Accession: MIMAT0041334
• Description: Echinococcus granulosus egr-miR-10292-3p mature miRNA
• Sequence: 59 - GCUGUUGCGGUCAUGUUG - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25168356
   Genome-wide sequencing of small RNAs reveals a tissue-specific loss of conserved microRNA families in Echinococcus granulosus
   Bai Y, Zhang Z, Jin L, Kang H, Zhu Y, Zhang L, Li X, Ma F, Zhao L, Shi B, Li J, McManus DP, Zhang W, Wang S
   BMC Genomics (2014) 15:736