Stem-loop gma-MIR10405a

Accession

MI0033431

Description

Glycine max gma-MIR10405a precursor miRNA

Sequence

2179 reads, 50.0 reads per million, 137 experiments

auacucccuccuuuucuuuuuuaugagaaacaacuuuuucaguauaagaaauacauugaaacUUGUUUCUUAUAAAAAGGACCggagguagua
.((((.(((((...(((((((((((((((((((...(((((((((.....))))..))))).)))))))))))))))))))..))))).))))

Structure

a    c     uuu                   cuu     --    a 
 uacu ccucc   ucuuuuuuaugagaaacaa   uuuca  guau a
 |||| |||||   |||||||||||||||||||   |||||  |||| g
 auga ggagg   AGGAAAAAUAUUCUUUGUU   aaagu  caua a
-    u     -CC                   --c     ua    a 

Annotation confidence Not enough data

Genome context

chr1: 3329190-3329282 [+]

Mature gma-miR10405a-3p

• Accession: MIMAT0041639
• Description: Glycine max gma-miR10405a-3p mature miRNA
• Sequence: 63 - UUGUUUCUUAUAAAAAGGACC - 83
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25747880
   Evolutionary patterns and coevolutionary consequences of MIRNA genes and microRNA targets triggered by multiple mechanisms of genomic duplications in soybean
   "Zhao M, Meyers BC, Cai C, Xu W, Ma J"
   "Plant Cell (2015) 27:546-562