Stem-loop gma-MIR10407a

Accession

MI0033435

Description

Glycine max gma-MIR10407a precursor miRNA

Sequence

14514 reads, 27.0 reads per million, 166 experiments

uuauUUUUGUGACAUUUUCAUCccucugugccacauggguucuuuaauuaacgacaauggaugaaAGUUAACGGAUGAAUGAAUUUGUCacauuuuuuu
.......(((((((..(((((.(.(((((...((....((((................))))....))..))))).).)))))..))))))).......

Structure

uuauUUU       UU     C c     gcc  augg    uuuaauu 
       UGUGACA  UUCAU c ucugu   ac    guuc       a
       |||||||  ||||| | |||||   ||    ||||        
       acaCUGU  AAGUA G AGGCA   UG    uagg       a
uuuuuuu       UU     A U     -AU  Aaag    uaacagc 

Annotation confidence Low

Genome context

chr1: 27712399-27712497 [+]

Mature gma-miR10407a-5p

• Accession: MIMAT0054489
• Description: Glycine max gma-miR10407a-5p mature miRNA
• Sequence: 5 - UUUUGUGACAUUUUCAUC - 22
• Evidence: experimental ; unknown

Mature gma-miR10407a-3p

• Accession: MIMAT0041643
• Description: Glycine max gma-miR10407a-3p mature miRNA
• Sequence: 66 - AGUUAACGGAUGAAUGAAUUUGUC - 89
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25747880
   Evolutionary patterns and coevolutionary consequences of MIRNA genes and microRNA targets triggered by multiple mechanisms of genomic duplications in soybean
   "Zhao M, Meyers BC, Cai C, Xu W, Ma J"
   "Plant Cell (2015) 27:546-562