Stem-loop gma-MIR10411

Accession

MI0033440

Description

Glycine max gma-MIR10411 precursor miRNA

Sequence

uuaaaaaucgUAAUUUUAGACUGAUAUUUUGCCUacaauaucaugcagauauaaauugagcauauugaguauuuagguaagcauaauauauguuuagggguaaauagcauaauuaaggacaauuaagccauuuacaccuaaacauaagcuauacuuuccuaaauaugggauauauauggacugcuuguaugauuuauggauaucacaauaucuuuguaauauuguaggcaagagaucagccuaaaacuugacuacucc
.......(((...((((((.(((((.(((((((((((((((..(((((((((((((((((((((((..(((((((((.(((.(((...((((((((((.((((((.((.(((((......))))).)).)))))).))))))))))...))).))).)))))))))..)))).........)))))....))))))))(((((....)))))))))))))))))))))))))).))))).))))))..))).......

Structure

uuaaaaa   UAA      A     A               ca      --------------        ----     ---------    ga         u   c   aua          g      a  a     aa 
       ucg   UUUUAG CUGAU UUUUGCCUacaauau  ugcaga              uauaaauu    gagca         uauu  guauuuagg aag aua   uauguuuagg guaaau gc uaauu  g
       |||   |||||| ||||| |||||||||||||||  ||||||              ||||||||    |||||         ||||  ||||||||| ||| |||   |||||||||| |||||| || |||||   
       agu   aaaauc gacua agaacggauguuaua  auguuu              guauuuag    uucgu         auag  uauaaaucc uuc uau   auacaaaucc cauuua cg auuaa  g
ccucauc   -uc      c     g               --      cuauaacacuauag        uaug     cagguauau    gg         u   a   cga          a      c  a     ca 

Annotation confidence Not enough data

Genome context

chr2: 392903-393160 [+]

Mature gma-miR10411

• Accession: MIMAT0041648
• Description: Glycine max gma-miR10411 mature miRNA
• Sequence: 11 - UAAUUUUAGACUGAUAUUUUGCCU - 34
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25747880
   Evolutionary patterns and coevolutionary consequences of MIRNA genes and microRNA targets triggered by multiple mechanisms of genomic duplications in soybean
   "Zhao M, Meyers BC, Cai C, Xu W, Ma J"
   "Plant Cell (2015) 27:546-562