Stem-loop gma-MIR10407d

Accession

MI0033447

Description

Glycine max gma-MIR10407d precursor miRNA

Sequence

10956 reads, 31.0 reads per million, 173 experiments

aaucauuucaacaacaaauuugucacuuugugcCACGUAGGCUAUUUUAUUAACaguaauggccgaaagUUAACGGCUGGAUAUAUUUGUUGCacuuuuuaca
...........((((((((.((((...((((...((...(((((((...........)))))))....))..))))...)))).))))))))...........

Structure

aaucauuucaa        u    acu    gcC  -GUA       UUAU 
           caacaaau uguc   uugu   AC    GGCUAUU    U
           |||||||| ||||   ||||   ||    |||||||    A
           GUUGUUUA AUAG   GGCA   Ug    ccgguaa    A
acauuuuucaC        U    GUC    -AU  aaag       ugaC 

Annotation confidence Low

Genome context

chr3: 8041380-8041482 [-]

Mature gma-miR10407d-5p

• Accession: MIMAT0054500
• Description: Glycine max gma-miR10407d-5p mature miRNA
• Sequence: 34 - CACGUAGGCUAUUUUAUUAAC - 54
• Evidence: experimental ; unknown

Mature gma-miR10407d-3p

• Accession: MIMAT0041655
• Description: Glycine max gma-miR10407d-3p mature miRNA
• Sequence: 70 - UUAACGGCUGGAUAUAUUUGUUGC - 93
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25747880
   Evolutionary patterns and coevolutionary consequences of MIRNA genes and microRNA targets triggered by multiple mechanisms of genomic duplications in soybean
   "Zhao M, Meyers BC, Cai C, Xu W, Ma J"
   "Plant Cell (2015) 27:546-562