Stem-loop gma-MIR10415

Accession

MI0033448

Description

Glycine max gma-MIR10415 precursor miRNA

Sequence

8272 reads, 24.0 reads per million, 176 experiments

cuauugggugAUCUUAGAAUGUGAGUUUGGAUCUaauucaacaucaaauguuagcucauagggugaggguuauccuccacuuauauacucuaucuuggcauuaucucuagccaauguggaacuuagacuuUUGAAUGGAUCUAAGAUAgguucugauaucaucuuaga
(((..(((((((.(((((((.((..((((((((((.(((((................(((((..((((.....))))..)))))....(((((.(((((..........))))).)))))..........))))))))))))))).)).))))))).)))))))))).

Structure

-   uu       C       G  AG          a     caucaaauguuagcucauagggugaggguuauccuccacuuauauac     c     auua 
 cua  gggugAU UUAGAAU UG  UUUGGAUCUa uucaa                                               ucuau uuggc    u
 |||  ||||||| ||||||| ||  |||||||||| |||||                                               ||||| |||||     
 gau  ucuacua agucuug AU  GAAUCUAGGU AAGUU                                               aggug aaccg    c
a   --       u       g  -A          -     -------------------------------------uucagauuca     u     aucu 

Annotation confidence Medium

Genome context

chr3: 35139836-35140003 [-]

Mature gma-miR10415-5p

• Accession: MIMAT0041656
• Description: Glycine max gma-miR10415-5p mature miRNA
• Sequence: 11 - AUCUUAGAAUGUGAGUUUGGAUCU - 34
• Evidence: experimental ; Illumina [1]

Mature gma-miR10415-3p

• Accession: MIMAT0054501
• Description: Glycine max gma-miR10415-3p mature miRNA
• Sequence: 131 - UUGAAUGGAUCUAAGAUA - 148
• Evidence: experimental ; unknown

References

1. PubMed ID: 25747880
   Evolutionary patterns and coevolutionary consequences of MIRNA genes and microRNA targets triggered by multiple mechanisms of genomic duplications in soybean
   "Zhao M, Meyers BC, Cai C, Xu W, Ma J"
   "Plant Cell (2015) 27:546-562