Stem-loop gma-MIR10405e

Accession

MI0033449

Description

Glycine max gma-MIR10405e precursor miRNA

Sequence

1891 reads, 14.0 reads per million, 147 experiments

uucuccauccagucCUUUUUAUAAGAAACAAGcacuaaaacuUUGUUUCUUAUAAAAAGGACCggauguagua
..((.(((((.(((((((((((((((((((((.........))))))))))))))))))))).))))).))..

Structure

uu  c     a                     cac 
  cu caucc gucCUUUUUAUAAGAAACAAG   u
  || ||||| |||||||||||||||||||||   a
  ga guagg CAGGAAAAAUAUUCUUUGUUu   a
au  u     C                     caa 

Annotation confidence High

Genome context

chr4: 16369687-16369759 [+]

Mature gma-miR10405e-5p

• Accession: MIMAT0054502
• Description: Glycine max gma-miR10405e-5p mature miRNA
• Sequence: 15 - CUUUUUAUAAGAAACAAG - 32
• Evidence: experimental ; unknown

Mature gma-miR10405e-3p

• Accession: MIMAT0041657
• Description: Glycine max gma-miR10405e-3p mature miRNA
• Sequence: 43 - UUGUUUCUUAUAAAAAGGACC - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25747880
   Evolutionary patterns and coevolutionary consequences of MIRNA genes and microRNA targets triggered by multiple mechanisms of genomic duplications in soybean
   "Zhao M, Meyers BC, Cai C, Xu W, Ma J"
   "Plant Cell (2015) 27:546-562