Stem-loop gma-MIR10416

Accession

MI0033450

Description

Glycine max gma-MIR10416 precursor miRNA

Sequence

12206 reads, 24.0 reads per million, 170 experiments

auucugaccaaggcacuuccaaaagccaaAUUUGAAUACUUGAGACAAAAGCUuggaguuugcaauuccaaagucaaggaggaguguuAAGAUUUGACUGUUGGAACUGCCUaacaaauuau
..........(((((.((((((.((.(((((((.(((((((.........((((((((((...)))))).)))).......))))))).))))))).)).)))))).)))))..........

Structure

auucugacca     c      a  c       G       GAGACAAAA    -      u 
          aggca uuccaa ag caaAUUU AAUACUU         GCUu ggaguu  
          ||||| |||||| || ||||||| |||||||         |||| |||||| g
          UCCGU AAGGUU UC GUUUAGA uugugag         ugaa ccuuaa  
uauuaaacaa     C      G  A       A       --gaggaac    a      c 

Annotation confidence Low

Genome context

chr4: 45286970-45287091 [+]

Mature gma-miR10416-5p

• Accession: MIMAT0054503
• Description: Glycine max gma-miR10416-5p mature miRNA
• Sequence: 30 - AUUUGAAUACUUGAGACAAAAGCU - 53
• Evidence: experimental ; unknown

Mature gma-miR10416-3p

• Accession: MIMAT0041658
• Description: Glycine max gma-miR10416-3p mature miRNA
• Sequence: 89 - AAGAUUUGACUGUUGGAACUGCCU - 112
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25747880
   Evolutionary patterns and coevolutionary consequences of MIRNA genes and microRNA targets triggered by multiple mechanisms of genomic duplications in soybean
   "Zhao M, Meyers BC, Cai C, Xu W, Ma J"
   "Plant Cell (2015) 27:546-562