Stem-loop gma-MIR10417

Accession

MI0033452

Description

Glycine max gma-MIR10417 precursor miRNA

Sequence

14099 reads, 34.0 reads per million, 177 experiments

guaaauguaugggggagggucauuguacaCAGCCUUACCCUUGCAUAUacacaaaGAGGCUGUUUCCAGAUUUGAACCCauaacuaugg
.......((((((...(((((..((...((((((((....(((........))).))))))))...)))))))...)))))).......

Structure

guaaaug      gga     au  uac        ACCC   CAU 
       uauggg   ggguc  ug   aCAGCCUU    UUG   A
       ||||||   |||||  ||   ||||||||    |||    
       auaCCC   UUUAG  AC   UGUCGGAG    aac   U
gguauca      AAG     --  CUU        ---a   aca 

Annotation confidence Low

Genome context

chr4: 37097209-37097297 [-]

Mature gma-miR10417-5p

• Accession: MIMAT0054505
• Description: Glycine max gma-miR10417-5p mature miRNA
• Sequence: 30 - CAGCCUUACCCUUGCAUAU - 48
• Evidence: experimental ; unknown

Mature gma-miR10417-3p

• Accession: MIMAT0041660
• Description: Glycine max gma-miR10417-3p mature miRNA
• Sequence: 56 - GAGGCUGUUUCCAGAUUUGAACCC - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25747880
   Evolutionary patterns and coevolutionary consequences of MIRNA genes and microRNA targets triggered by multiple mechanisms of genomic duplications in soybean
   "Zhao M, Meyers BC, Cai C, Xu W, Ma J"
   "Plant Cell (2015) 27:546-562