Stem-loop gma-MIR10422

Accession

MI0033461

Description

Glycine max gma-MIR10422 precursor miRNA

Sequence

3820 reads, 216.0 reads per million, 160 experiments

uGUUGUUGGUGGUGUUGUUuuuuuaaucagaauuguaguuuuacuucaauaaucugcauaauaaagguauacaagggauuacgaagauaaaacuccaaUUCUGAUUAGAGAGCAACACCaauaacacuu
...(((((.((((((((((((((.(((((((((((.(((((((((((..((((((.....(((....))).....)))))).)))).))))))).))))))))))))))))))))))))).)))))...

Structure

uGU     G              u           u       -    aa      gcaua   a 
   UGUUG UGGUGUUGUUuuuu aaucagaauug aguuuua cuuc  uaaucu     aua a
   ||||| |||||||||||||| ||||||||||| ||||||| ||||  ||||||     |||  
   acaau aCCACAACGAGAGA UUAGUCUUaac ucaaaau gaag  auuagg     uau g
uuc     a              -           c       a    -c      gaaca   g 

Annotation confidence Medium

Genome context

chr6: 27463074-27463202 [+]

Mature gma-miR10422-5p

• Accession: MIMAT0054511
• Description: Glycine max gma-miR10422-5p mature miRNA
• Sequence: 2 - GUUGUUGGUGGUGUUGUU - 19
• Evidence: experimental ; unknown

Mature gma-miR10422-3p

• Accession: MIMAT0041669
• Description: Glycine max gma-miR10422-3p mature miRNA
• Sequence: 99 - UUCUGAUUAGAGAGCAACACC - 119
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25747880
   Evolutionary patterns and coevolutionary consequences of MIRNA genes and microRNA targets triggered by multiple mechanisms of genomic duplications in soybean
   "Zhao M, Meyers BC, Cai C, Xu W, Ma J"
   "Plant Cell (2015) 27:546-562