Stem-loop gma-MIR10405b

Accession

MI0033465

Description

Glycine max gma-MIR10405b precursor miRNA

Sequence

2313 reads, 52.0 reads per million, 154 experiments

auacuaccuccaguccUUUUUAUAAGAAACAAGUUucaguguaaaauucacuauaacUUGUUUCUUAUAAAAAGGACCaaagggagua
.((((.(((...(((((((((((((((((((((((..((((.......))))..)))))))))))))))))))))))...))).))))

Structure

a    a   cca                       uc    ua 
 uacu ccu   guccUUUUUAUAAGAAACAAGUU  agug  a
 |||| |||   |||||||||||||||||||||||  ||||  a
 auga gga   CAGGAAAAAUAUUCUUUGUUcaa  ucac  a
-    g   aaC                       ua    uu 

Annotation confidence Medium

Genome context

chr8: 11407785-11407872 [+]

Mature gma-miR10405b-5p

• Accession: MIMAT0054515
• Description: Glycine max gma-miR10405b-5p mature miRNA
• Sequence: 17 - UUUUUAUAAGAAACAAGUU - 35
• Evidence: experimental ; unknown

Mature gma-miR10405b-3p

• Accession: MIMAT0041673
• Description: Glycine max gma-miR10405b-3p mature miRNA
• Sequence: 58 - UUGUUUCUUAUAAAAAGGACC - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25747880
   Evolutionary patterns and coevolutionary consequences of MIRNA genes and microRNA targets triggered by multiple mechanisms of genomic duplications in soybean
   "Zhao M, Meyers BC, Cai C, Xu W, Ma J"
   "Plant Cell (2015) 27:546-562