Stem-loop gma-MIR10425

Accession

MI0033467

Description

Glycine max gma-MIR10425 precursor miRNA

Sequence

2271 reads, 8.0 reads per million, 162 experiments

cauucugugcacacuacuaagaaaauugAUUUCAAAGACACUUGUAUGGGGCuuuucacgucgguUUACAACCGUCUUUGAAAUCGCCUucauagaaag
..(((((((.................(((((((((((((..(((((...(((.......)))....)))))..)))))))))))))....)))))))..

Structure

ca       cacacuacuaagaaaau             AC     -UGG   uu 
  uucugug                 ugAUUUCAAAGAC  UUGUA    GGC  u
  |||||||                 |||||||||||||  |||||    |||  u
  aagauac                 GCUAAAGUUUCUG  AACAU    cug  c
ga       -------------uUCC             CC     Uugg   ca 

Annotation confidence Medium

Genome context

chr8: 47654258-47654356 [-]

Mature gma-miR10425-5p

• Accession: MIMAT0054517
• Description: Glycine max gma-miR10425-5p mature miRNA
• Sequence: 29 - AUUUCAAAGACACUUGUAUGGGGC - 52
• Evidence: experimental ; unknown

Mature gma-miR10425-3p

• Accession: MIMAT0041675
• Description: Glycine max gma-miR10425-3p mature miRNA
• Sequence: 66 - UUACAACCGUCUUUGAAAUCGCCU - 89
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25747880
   Evolutionary patterns and coevolutionary consequences of MIRNA genes and microRNA targets triggered by multiple mechanisms of genomic duplications in soybean
   "Zhao M, Meyers BC, Cai C, Xu W, Ma J"
   "Plant Cell (2015) 27:546-562