Stem-loop gma-MIR4374c

Accession

MI0033472

Description

Glycine max gma-MIR4374c precursor miRNA

Sequence

9608 reads, 24.0 reads per million, 170 experiments

gucuuagaaaaccaggcuuuaaagacgaugcugacgucacgaccgucuuugaaGGUUGACUUUCUAAGACGuugucgacauuagcaccgucuuugaagcuuggcuuucuaagacagucgugaugucagcaccgucuuagaagccugacuuucuaagacguucgugauguCAACACCGUCUUUGAAGCCUGGcuuucuaaga
.(((((((((.((((((((((((((((.((.(((((((((((.((((((.(((((((...(((((((((((.(((.(((((((..((.(((((.(((((...)))))..))))).))..))))))).))).)))))))))))...))))))).)))))).))))))))))).)).)))))))))))))))).)))))))))

Structure

g         a                a  c           c      u       GAC           u   c       gc  c     -u     u 
 ucuuagaaa ccaggcuuuaaagacg ug ugacgucacga cgucuu gaaGGUU   UUUCUAAGACG ugu gacauua  ac gucuu  gaagc  
 ||||||||| |||||||||||||||| || ||||||||||| |||||| |||||||   ||||||||||| ||| |||||||  || |||||  ||||| u
 agaaucuuu GGUCCGAAGUUUCUGC AC ACuguagugcu gcagaa cuuucag   gaagauucugc acg cuguagu  ug cagaa  uuucg  
-         c                C  A           u      u       ucc           c   a       gc  a     uc     g 

Annotation confidence Low

Genome context

chr9: 35694869-35695069 [-]

Mature gma-miR4374c-5p

• Accession: MIMAT0054522
• Description: Glycine max gma-miR4374c-5p mature miRNA
• Sequence: 54 - GGUUGACUUUCUAAGACG - 71
• Evidence: experimental ; unknown

Mature gma-miR4374c-3p

• Accession: MIMAT0041680
• Description: Glycine max gma-miR4374c-3p mature miRNA
• Sequence: 170 - CAACACCGUCUUUGAAGCCUGG - 191
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25747880
   Evolutionary patterns and coevolutionary consequences of MIRNA genes and microRNA targets triggered by multiple mechanisms of genomic duplications in soybean
   "Zhao M, Meyers BC, Cai C, Xu W, Ma J"
   "Plant Cell (2015) 27:546-562