Stem-loop gma-MIR10406b

Accession

MI0033477

Description

Glycine max gma-MIR10406b precursor miRNA

Sequence

3637 reads, 13.0 reads per million, 173 experiments

gacacugcucaugaauuauauaauacccaagaccucacaccucuuuucaaacacgucuaacaUAUUGCGCUACAAUUUAACACcucagauuucuagcuuggaaccauacacuuucuuuuuaacaccucacacaaacauuuuucuuaagguaagcauCAGUCGAGUUAUUGUAUAAUUCACaauucauaac
...........((((((((((((((....((((.....................)))).....((((.....)))).......(((.((((....((((...(((..........................................)))))))...))))))).))))))))))))))...........

Structure

gacacugcuca              ---------------------------------------------------cccaagaccucacaccucuuuucaaacacgucuaacaU    C 
           ugaauuauauaaua                                                                                         AUUG G
           ||||||||||||||                                                                                         |||| C
           ACUUAAUAUGUUAU                                                                                         UAAC U
caauacuuaaC              UGAGCUGACuacgaauggaauucuuuuuacaaacacacuccacaauuuuucuuucacauaccaagguucgaucuuuagacucCACAAUU    A 

Annotation confidence Low

Genome context

chr10: 35380775-35380964 [-]

Mature gma-miR10406b-5p

• Accession: MIMAT0054527
• Description: Glycine max gma-miR10406b-5p mature miRNA
• Sequence: 63 - UAUUGCGCUACAAUUUAACAC - 83
• Evidence: experimental ; unknown

Mature gma-miR10406b-3p

• Accession: MIMAT0041685
• Description: Glycine max gma-miR10406b-3p mature miRNA
• Sequence: 157 - CAGUCGAGUUAUUGUAUAAUUCAC - 180
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25747880
   Evolutionary patterns and coevolutionary consequences of MIRNA genes and microRNA targets triggered by multiple mechanisms of genomic duplications in soybean
   "Zhao M, Meyers BC, Cai C, Xu W, Ma J"
   "Plant Cell (2015) 27:546-562