Stem-loop gma-MIR4414b

Accession

MI0033480

Description

Glycine max gma-MIR4414b precursor miRNA

Literature search

1 open access papers mention gma-MIR4414b
(1 sentences)

Sequence

1141238 reads, 2886.0 reads per million, 157 experiments

aggcgguggaagauggcugaaacucAGCUGCUGACUCGUUGGUUCGagagcucaccauuaagaucgaucgaugaugucggcacucagcccauguacauaauuaagguggucugcuucugAUCCAACGAUGCGGGAGCUGCauuuagucgugacugucacgucuug
(((((.(((.(((((((((((...(((((.(((..(((((((.(((.((((..((((((..(((......(((((((.(((.....))).)))).))).)))..))))))..)))).))).)))))))..))).)))))..)))))))))..)).))))))))..

Structure

--     g   a  --         acu     G   AC       U   a    uc      aa   cgaucg   -    c   a 
  aggcg ugg ag  auggcugaa   cAGCU CUG  UCGUUGG UCG gagc  accauu  gau      aug augu ggc c
  ||||| ||| ||  |||||||||   ||||| |||  ||||||| ||| ||||  ||||||  |||      ||| |||| ||| u
  ucugc acu uc  ugcugauuu   GUCGA GGC  AGCAACC Agu uucg  uggugg  uua      uac ugua ccg c
gu     -   g  ag         -aC     G   GU       U   c    uc      aa   -----a   a    c   a 

Annotation confidence High

Genome context

Unknown

Mature gma-miR4414b-5p

• Accession: MIMAT0041688
• Description: Glycine max gma-miR4414b-5p mature miRNA
• Sequence: 26 - AGCUGCUGACUCGUUGGUUCG - 46
• Evidence: experimental ; Illumina [1]

Mature gma-miR4414b-3p

• Accession: MIMAT0054530
• Description: Glycine max gma-miR4414b-3p mature miRNA
• Sequence: 120 - AUCCAACGAUGCGGGAGCUGC - 140
• Evidence: experimental ; unknown

References

1. PubMed ID: 25747880
   Evolutionary patterns and coevolutionary consequences of MIRNA genes and microRNA targets triggered by multiple mechanisms of genomic duplications in soybean
   "Zhao M, Meyers BC, Cai C, Xu W, Ma J"
   "Plant Cell (2015) 27:546-562