Stem-loop gma-MIR4997b

Accession

MI0033483

Description

Glycine max gma-MIR4997b precursor miRNA

Sequence

15924 reads, 88.0 reads per million, 178 experiments

gguguUGAUUUGCGUCAGGAGUUUUCUGuugaggcugagcaaguagaagcgaggaggcaUCGCGGCAGAAGAAAUCCUGAUcaucaagcgc
.(((((....((.(((((((.((((((((((..(((..((........)).....)))....))))))))))..)))))))))...)))))

Structure

g     GAUU  C       -G          --ag   ---ga  aag 
 guguU    UG GUCAGGA  UUUUCUGuug    gcu     gc   u
 |||||    || |||||||  ||||||||||    |||     ||    
 cgcga    ac UAGUCCU  AGAAGACGGC    cgg     cg   a
-     -acu  -       AA          GCUa   aggag  aag 

Annotation confidence Medium

Genome context

chr4: 24905205-24905295 [+]

Mature gma-miR4997b-5p

• Accession: MIMAT0054532
• Description: Glycine max gma-miR4997b-5p mature miRNA
• Sequence: 6 - UGAUUUGCGUCAGGAGUUUUCUG - 28
• Evidence: experimental ; unknown

Mature gma-miR4997b-3p

• Accession: MIMAT0041691
• Description: Glycine max gma-miR4997b-3p mature miRNA
• Sequence: 60 - UCGCGGCAGAAGAAAUCCUGAU - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25747880
   Evolutionary patterns and coevolutionary consequences of MIRNA genes and microRNA targets triggered by multiple mechanisms of genomic duplications in soybean
   "Zhao M, Meyers BC, Cai C, Xu W, Ma J"
   "Plant Cell (2015) 27:546-562