Stem-loop gma-MIR10429

Accession

MI0033484

Description

Glycine max gma-MIR10429 precursor miRNA

Sequence

2845 reads, 14.0 reads per million, 172 experiments

agcaugugggUGAGGACAAAACAUGUUGAAAAGUuuuauguugguuugugggaucagucguugauccuggaagcaguuagagcugauuuuugaggucucaaaaaaggcuaccuauaaagggauaagccaacacGAGACUUUUCAGCAUGCUUUGuccucacucacacgcuc
(((.((((((((((((((((.((((((((((((((((.((((((((((((((((((.....)))))))............((((..(((((((....))))))).)))).(((....))).))))))))))).)))))))))))))))).)))))))))))))))).))).

Structure

-   a                A                a           gggaucagucguugauccuggaagcaguuag    ga       g 
 agc ugugggUGAGGACAAA CAUGUUGAAAAGUuuu uguugguuugu                               agcu  uuuuuga g
 ||| |||||||||||||||| |||||||||||||||| |||||||||||                               ||||  |||||||  
 ucg acacucacuccuGUUU GUACGACUUUUCAGAG acaaccgaaua                               ucgg  aaaaacu u
c   c                C                c           -------------------gggaaauaucca    -a       c 

Annotation confidence Low

Genome context

chr12: 13957365-13957535 [-]

Mature gma-miR10429-5p

• Accession: MIMAT0041692
• Description: Glycine max gma-miR10429-5p mature miRNA
• Sequence: 11 - UGAGGACAAAACAUGUUGAAAAGU - 34
• Evidence: experimental ; Illumina [1]

Mature gma-miR10429-3p

• Accession: MIMAT0054533
• Description: Glycine max gma-miR10429-3p mature miRNA
• Sequence: 134 - GAGACUUUUCAGCAUGCUUUG - 154
• Evidence: experimental ; unknown

References

1. PubMed ID: 25747880
   Evolutionary patterns and coevolutionary consequences of MIRNA genes and microRNA targets triggered by multiple mechanisms of genomic duplications in soybean
   "Zhao M, Meyers BC, Cai C, Xu W, Ma J"
   "Plant Cell (2015) 27:546-562