Stem-loop gma-MIR5377b

Accession

MI0033485

Description

Glycine max gma-MIR5377b precursor miRNA

Sequence

10821 reads, 27.0 reads per million, 172 experiments

accguuguagaauguugaguuuucuacaucggucACAACUAAAGGACCGAUGUAGAAUGUUCAACAUUcuacaucguu
..((.((((((((((((((..(((((((((((((.(.......))))))))))))))..)))))))))))))).))..

Structure

ac  u              uu             A AA 
  cg uguagaauguugag  uucuacaucgguc C  C
  || ||||||||||||||  ||||||||||||| |  U
  gc acaucUUACAACUU  AAGAUGUAGCCAG G  A
uu  u              GU             - AA 

Annotation confidence Low

Genome context

chr12: 14993964-14994041 [-]

Mature gma-miR5377b-5p

• Accession: MIMAT0054534
• Description: Glycine max gma-miR5377b-5p mature miRNA
• Sequence: 35 - ACAACUAAAGGACCGAUGUAGAAU - 58
• Evidence: experimental ; unknown

Mature gma-miR5377b-3p

• Accession: MIMAT0041693
• Description: Glycine max gma-miR5377b-3p mature miRNA
• Sequence: 45 - GACCGAUGUAGAAUGUUCAACAUU - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25747880
   Evolutionary patterns and coevolutionary consequences of MIRNA genes and microRNA targets triggered by multiple mechanisms of genomic duplications in soybean
   "Zhao M, Meyers BC, Cai C, Xu W, Ma J"
   "Plant Cell (2015) 27:546-562