Stem-loop gma-MIR10427b

Accession

MI0033486

Description

Glycine max gma-MIR10427b precursor miRNA

Sequence

148235 reads, 208.0 reads per million, 177 experiments

caagaggcucCAAGAGAAUUGGGCUAGAGCUGauaaAGAAGGCCCUAGGGUUCUCugaaccucaggg
...((((.((..(((((((((((((....((.....))..)))))...)))))))))).))))....

Structure

-caa    c  CA        ---     AGAG  G 
    gagg uc  AGAGAAUU   GGGCU    CU a
    |||| ||  ||||||||   |||||    || u
    cucc ag  uCUCUUGG   CCCGG    GA a
ggga    a  --        GAU     --AA  a 

Annotation confidence Medium

Genome context

chr12: 27140483-27140549 [+]

Mature gma-miR10427b-5p

• Accession: MIMAT0041694
• Description: Glycine max gma-miR10427b-5p mature miRNA
• Sequence: 11 - CAAGAGAAUUGGGCUAGAGCUG - 32
• Evidence: experimental ; Illumina [1]

Mature gma-miR10427b-3p

• Accession: MIMAT0054535
• Description: Glycine max gma-miR10427b-3p mature miRNA
• Sequence: 37 - AGAAGGCCCUAGGGUUCUC - 55
• Evidence: experimental ; unknown

References

1. PubMed ID: 25747880
   Evolutionary patterns and coevolutionary consequences of MIRNA genes and microRNA targets triggered by multiple mechanisms of genomic duplications in soybean
   "Zhao M, Meyers BC, Cai C, Xu W, Ma J"
   "Plant Cell (2015) 27:546-562