Stem-loop gma-MIR10430

Accession

MI0033487

Description

Glycine max gma-MIR10430 precursor miRNA

Sequence

27007 reads, 57.0 reads per million, 161 experiments

uaggccagguuaggcuuuaaaaggccugaaccuaaccuacgaugaaauuuugAGGCUUGAGCCUAGUCUAuagccuaucaaagauuuuuauuuuggcUCGGUCUGACCUUUUUAAAAGCCUaguuuggccu
.(((((((((((((((((((((((.(.((.((....(((.(((((((((((((((((..((......))..))))..))))))..))))))).)))...)))).).))))))..)))))))))))))))))

Structure

u                 --      c u  a  uaac   c       --      --    UG  CC 
 aggccagguuaggcuuu  aaaagg c ga cc    cua gaugaaa  uuuugA  GGCU  AG  U
 |||||||||||||||||  |||||| | || ||    ||| |||||||  ||||||  ||||  ||   
 uccgguuugaUCCGAAA  UUUUCC G CU GG    ggu uuauuuu  gaaacu  ccga  UC  A
-                 AU      A U  -  -CUc   u       ua      au    uA  UG 

Annotation confidence Low

Genome context

chr13: 17369247-17369377 [-]

Mature gma-miR10430-5p

• Accession: MIMAT0054536
• Description: Glycine max gma-miR10430-5p mature miRNA
• Sequence: 53 - AGGCUUGAGCCUAGUCUA - 70
• Evidence: experimental ; unknown

Mature gma-miR10430-3p

• Accession: MIMAT0041695
• Description: Glycine max gma-miR10430-3p mature miRNA
• Sequence: 98 - UCGGUCUGACCUUUUUAAAAGCCU - 121
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25747880
   Evolutionary patterns and coevolutionary consequences of MIRNA genes and microRNA targets triggered by multiple mechanisms of genomic duplications in soybean
   "Zhao M, Meyers BC, Cai C, Xu W, Ma J"
   "Plant Cell (2015) 27:546-562