Stem-loop gma-MIR10431

Accession

MI0033489

Description

Glycine max gma-MIR10431 precursor miRNA

Sequence

10206 reads, 23.0 reads per million, 175 experiments

cguuugaggaUUAGAAUAAACAUGUGUAGAAAUUccuagaggauaaaauuuggguuguUUUGGAUUGUUUUAUGAAUUUCaauucuguucuuauucuuuuauucgcaaauu
.(((((.((((.((((((((((.(.((.(((((((.(((((..((((((.......)))))).....))))).))))))).)).))))..)))))))...)))).))))).

Structure

c     a    --U       --   U U  A       c     ---ga      uu 
 guuug ggaU   AGAAUAA  ACA G GU GAAAUUc uagag     uaaaau  g
 ||||| ||||   |||||||  ||| | || ||||||| |||||     ||||||  g
 uaaac cuua   ucuuauu  ugu c ua CUUUAAG AUUUU     GUUUug  g
u     g    uuu       cu   - u  a       U     GUUAG      uu 

Annotation confidence Medium

Genome context

chr13: 28434772-28434882 [-]

Mature gma-miR10431-5p

• Accession: MIMAT0041697
• Description: Glycine max gma-miR10431-5p mature miRNA
• Sequence: 11 - UUAGAAUAAACAUGUGUAGAAAUU - 34
• Evidence: experimental ; Illumina [1]

Mature gma-miR10431-3p

• Accession: MIMAT0054538
• Description: Glycine max gma-miR10431-3p mature miRNA
• Sequence: 59 - UUUGGAUUGUUUUAUGAAUUUC - 80
• Evidence: experimental ; unknown

References

1. PubMed ID: 25747880
   Evolutionary patterns and coevolutionary consequences of MIRNA genes and microRNA targets triggered by multiple mechanisms of genomic duplications in soybean
   "Zhao M, Meyers BC, Cai C, Xu W, Ma J"
   "Plant Cell (2015) 27:546-562