Stem-loop gma-MIR10432

Accession

MI0033490

Description

Glycine max gma-MIR10432 precursor miRNA

Sequence

27638 reads, 191.0 reads per million, 178 experiments

agccauuuucUUUUCCAGAUCAUAUCGCCGGUUCuuccaggauugauguaguggaugaccuucucaugucucgugaugaaguauucgccggaaauuacucaaggcacaagcuuccaugaagaaaaccucagaugcaaagcgacgagagguccacugcaUCAAUCCUGGAAGAACCGGCGauauaaucuggaaaagaaaaugacua
((.(((((((((((((((((.((((((((((((((((((((((((((((((((((....((((((..((((((((..(((((....(((.((......))..)))....))))))))))..............((...))))))))))))))))))))))))))))))))))))))))))))).))))))))))))))))).)).

Structure

-  c                 C                                  ugac      au   ---------------------     au     auuc   -g  aa 
 ag cauuuucUUUUCCAGAU AUAUCGCCGGUUCuuccaggauugauguagugga    cuucuc  guc                     ucgug  gaagu    gcc  ga  u
 || ||||||||||||||||| ||||||||||||||||||||||||||||||||||    ||||||  |||                     |||||  |||||    |||  ||   
 uc guaaaagaaaaggucua uauaGCGGCCAAGAAGGUCCUAACUacgucaccu    ggagag  cag                     aguac  cuucg    cgg  cu  u
a  a                 a                                  ----      --   cgaaacguagacuccaaaaga     --     aaca   aa  ca 

Annotation confidence Medium

Genome context

chr13: 36656480-36656684 [-]

Mature gma-miR10432-5p

• Accession: MIMAT0041698
• Description: Glycine max gma-miR10432-5p mature miRNA
• Sequence: 11 - UUUUCCAGAUCAUAUCGCCGGUUC - 34
• Evidence: experimental ; Illumina [1]

Mature gma-miR10432-3p

• Accession: MIMAT0054539
• Description: Glycine max gma-miR10432-3p mature miRNA
• Sequence: 159 - UCAAUCCUGGAAGAACCGGCG - 179
• Evidence: experimental ; unknown

References

1. PubMed ID: 25747880
   Evolutionary patterns and coevolutionary consequences of MIRNA genes and microRNA targets triggered by multiple mechanisms of genomic duplications in soybean
   "Zhao M, Meyers BC, Cai C, Xu W, Ma J"
   "Plant Cell (2015) 27:546-562