Stem-loop gma-MIR5764b

Accession

MI0033493

Description

Glycine max gma-MIR5764b precursor miRNA

Sequence

agaccaaacaguuuaguuucaagcauagcaaguaaagcaugucuccuagauagugcaucagccacuacauucccuuucccuuuuuuuuguuugaugacauauggaaauugcucuaaaaaaucuacccacuuagcaugccucuuauuaagcuuuccuuggccuuuuaaguauuuuaaggacucgugaucacuauggaugacaaacucuuuggguaauagguaaugcugccaaguuuguaaagcccuaaccaaagcauacaauuccucagcacaaccaauauucuuguccacagagggaccacccccggcggcggaagaaagaaggaaucucgaucucauugaggagagauugagagcuuuuaaaggcuuuggugacuauccguucgcggacaUGAUGGAUCUUUGCUUGGUACCggacguuguc
.(((..(((.((((.((.(((((((.((...((....(((((((.(..((((((.((((((((...............(((((((((((((....)))...((((......)))).......(((((((((((...(((..................)))...)))))).....(((((...((.(((......))).))....))))))))))...(((..(((((......(((((..((..........)).))))).....)))))..))).........((((......)))).....(((....))).))))))))))..((((((((((........)))))))))).........)))..))))))))))).....).)))))))....)))).))))))).)).))))))))))

Structure

a   ca   a    a  u       u  caa  aaag       c ---ua      g     --   ------------------------acuacauucccuuuc          guuugaugacauauggaaauugcucuaaaaaaucuacccacuuagcaugccucuuauuaagcuuuccuuggccuuuuaaguauuuuaaggacucgugaucacuauggaugacaaacucuuuggguaaua   aa     ccaagu     aa  ccua 
 gac  aac guuu gu ucaagca ag   gu    caugucu c     gauagu cauca  gcc                                       ccuuuuuuuu                                                                                                                                 ggu  ugcug      uugua  gc    a
 |||  ||| |||| || ||||||| ||   ||    ||||||| |     |||||| |||||  |||                                       ||||||||||                                                                                                                                 |||  |||||      |||||  ||     
 cug  uug cagg CA GGUUCGU UC   UA    GUacagg g     cuauca guggu  cgg                                       ggaagaaaga                                                                                                                                 cca  acgac      aacau  cg    c
-   --   -    C  U       U  ---  GGUA       c cuugc      -     uu   aaauuuucgagaguuagagaggaguuacucuagcucuaa          ------------------------------------------------------------------------------------------aggcggcggcccccaccagggagacaccuguucuuauaa   ac     -uccuu     -a  aaac 

Annotation confidence Not enough data

Genome context

chr14: 36204271-36204693 [-]

Mature gma-miR5764b

• Accession: MIMAT0041701
• Description: Glycine max gma-miR5764b mature miRNA
• Sequence: 392 - UGAUGGAUCUUUGCUUGGUACC - 413
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25747880
   Evolutionary patterns and coevolutionary consequences of MIRNA genes and microRNA targets triggered by multiple mechanisms of genomic duplications in soybean
   "Zhao M, Meyers BC, Cai C, Xu W, Ma J"
   "Plant Cell (2015) 27:546-562