Stem-loop gma-MIR10437

Accession

MI0033501

Description

Glycine max gma-MIR10437 precursor miRNA

Sequence

3675 reads, 14.0 reads per million, 169 experiments

cuuuuuuuuuaacagacaauauaguuugaacauuucauccauagccacuaguauauuaugucacaauauuuuaguugaauaAUACACCUUAGUCUUACUGCCuuuucucauccacgggucuuacagcuacaguauuauucaucuaaaauaucagacuguugugcuuccagaaaaUAUUGUUCAAACAUAUACUGUUuaaaucaaaa
.(((..(((.(((((...((((.(((((((((((((.............((((((.((.(((...(((((((((.((((((((((....((((..((..((((............))))..))..))))..)))))))))).)))))))))..))))).))))))....))))....))))))))))))).))))).)))..))).

Structure

c   uu   u     aca    a         ----    auccauagccacu      u  u   aca         u          ACCU    CU  CU    uuucu 
 uuu  uuu aacag   auau guuugaaca    uuuc             aguaua ua guc   auauuuuag ugaauaAUAC    UAGU  UA  GCCu     c
 |||  ||| |||||   |||| |||||||||    ||||             |||||| || |||   ||||||||| ||||||||||    ||||  ||  ||||      
 aaa  aaa UUGUC   UAUA CAAACUUGU    aaag             ucgugu gu cag   uauaaaauc acuuauuaug    aucg  au  uggg     a
a   cu   u     --A    -         UAUa    ---------accu      u  -   -ac         u          --ac    ac  uc    caccu 

Annotation confidence Low

Genome context

chr16: 16521961-16522166 [-]

Mature gma-miR10437-5p

• Accession: MIMAT0054549
• Description: Glycine max gma-miR10437-5p mature miRNA
• Sequence: 82 - AUACACCUUAGUCUUACUGCC - 102
• Evidence: experimental ; unknown

Mature gma-miR10437-3p

• Accession: MIMAT0041709
• Description: Glycine max gma-miR10437-3p mature miRNA
• Sequence: 175 - UAUUGUUCAAACAUAUACUGUU - 196
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25747880
   Evolutionary patterns and coevolutionary consequences of MIRNA genes and microRNA targets triggered by multiple mechanisms of genomic duplications in soybean
   "Zhao M, Meyers BC, Cai C, Xu W, Ma J"
   "Plant Cell (2015) 27:546-562