Stem-loop gma-MIR10438

Accession

MI0033502

Description

Glycine max gma-MIR10438 precursor miRNA

Sequence

160753 reads, 329.0 reads per million, 176 experiments

aAAAGUUCUUCAACCAAGACAuuuugguucagacuuaaauagaggaaagagauuuucaguaccauuugacccaguaggguauaccuauugggauuauauugauguUUGGACUAAGGUUUUUUGGCACcaaaauaccc
.............((((((.((((((((((((((...((((..(((((....)))))............(((((((((.....)))))))))....))))...)))))))))))))).)))))).............

Structure

aAAAGUUCUUCAA      C              uua    gaggaaagagauuuucaguaccauuuga         g 
             CCAAGA Auuuugguucagac   aaua                            cccaguagg u
             |||||| ||||||||||||||   ||||                            ||||||||| a
             GGUUUU UGGAAUCAGGUUug   uuau                            ggguuaucc u
cccauaaaacCAC      U              uag    ------------------------auua         a 

Annotation confidence Medium

Genome context

chr17: 21204583-21204719 [-]

Mature gma-miR10438-5p

• Accession: MIMAT0054550
• Description: Glycine max gma-miR10438-5p mature miRNA
• Sequence: 2 - AAAGUUCUUCAACCAAGACA - 21
• Evidence: experimental ; unknown

Mature gma-miR10438-3p

• Accession: MIMAT0041710
• Description: Glycine max gma-miR10438-3p mature miRNA
• Sequence: 106 - UUGGACUAAGGUUUUUUGGCAC - 127
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25747880
   Evolutionary patterns and coevolutionary consequences of MIRNA genes and microRNA targets triggered by multiple mechanisms of genomic duplications in soybean
   "Zhao M, Meyers BC, Cai C, Xu W, Ma J"
   "Plant Cell (2015) 27:546-562