Stem-loop gma-MIR10424c

Accession

MI0033504

Description

Glycine max gma-MIR10424c precursor miRNA

Sequence

2582 reads, 104.0 reads per million, 166 experiments

auuuauuuUUAGUCCCUAAUAAAUUAacaaauuuuuuguuugcuccaugauaaauauuucccauuuguuauuaacacagauuaaaacaaaauuuacuaauuuauuagaaaacaaaugcaaaaUUUUCUAAUUUAUUAGGGACUaaaacaaaau
......((((((((((((((((((((..(((((((.((((((.....((((((((........((((((.((((......))))))))))........)))))))).....)))))).)))))))..))))))))))))))))))))......

Structure

auuuau                    ac       u      cucca        auuuccca      a    ca 
      uuUUAGUCCCUAAUAAAUUA  aaauuuu uguuug     ugauaaau        uuuguu uuaa  c
      ||||||||||||||||||||  ||||||| ||||||     ||||||||        |||||| ||||   
      aaaaUCAGGGAUUAUUUAAU  UUUaaaa guaaac     auuauuua        aaacaa aauu  a
uaaaac                    CU       c      aaaag        aucauuua      -    ag 

Annotation confidence Low

Genome context

chr18: 20565122-20565274 [+]

Mature gma-miR10424c-5p

• Accession: MIMAT0054552
• Description: Glycine max gma-miR10424c-5p mature miRNA
• Sequence: 9 - UUAGUCCCUAAUAAAUUA - 26
• Evidence: experimental ; unknown

Mature gma-miR10424c-3p

• Accession: MIMAT0041712
• Description: Glycine max gma-miR10424c-3p mature miRNA
• Sequence: 123 - UUUUCUAAUUUAUUAGGGACU - 143
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25747880
   Evolutionary patterns and coevolutionary consequences of MIRNA genes and microRNA targets triggered by multiple mechanisms of genomic duplications in soybean
   "Zhao M, Meyers BC, Cai C, Xu W, Ma J"
   "Plant Cell (2015) 27:546-562