Stem-loop gma-MIR10186l

Accession

MI0033512

Description

Glycine max gma-MIR10186l precursor miRNA

Sequence

18061 reads, 37.0 reads per million, 173 experiments

uuuagucaccgaAGUUUAUAUUUUAAUUCUCaaacuaucucuacuguuaaauuuguuuaacuaauggaguuaaaaaaauuuaacggcagagacuUUUUGGGAAUUAAAAUGUAAACUUaagggauuaa
.((((((.((.(((((((((((((((((((((((...(((((.(((((((((((.(((((((.....))))))).))))))))))).)))))...)))))))))))))))))))))))..))))))))

Structure

u      a  -g                       cua     a           g       a 
 uuaguc cc  aAGUUUAUAUUUUAAUUCUCaaa   ucucu cuguuaaauuu uuuaacu a
 |||||| ||  |||||||||||||||||||||||   ||||| ||||||||||| ||||||| u
 aauuag gg  UUCAAAUGUAAAAUUAAGGGUUU   agaga ggcaauuuaaa aaauuga g
-      -  aa                       Uuc     c           a       g 

Annotation confidence Low

Genome context

chr19: 27924141-27924268 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from gma-MIR10186l

Mature gma-miR10186l-5p

• Accession: MIMAT0054559
• Description: Glycine max gma-miR10186l-5p mature miRNA
• Sequence: 13 - AGUUUAUAUUUUAAUUCUC - 31
• Evidence: experimental ; unknown

Mature gma-miR10186l-3p

• Accession: MIMAT0041720
• Description: Glycine max gma-miR10186l-3p mature miRNA
• Sequence: 95 - UUUUGGGAAUUAAAAUGUAAACUU - 118
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25747880
   Evolutionary patterns and coevolutionary consequences of MIRNA genes and microRNA targets triggered by multiple mechanisms of genomic duplications in soybean
   "Zhao M, Meyers BC, Cai C, Xu W, Ma J"
   "Plant Cell (2015) 27:546-562